A B C D E F G H I L M N O P Q R S T U V W Z

A

accept(File) - Method in class org.mediavirus.parvis.gui.MainFrame$27

accept(File) - Method in class org.mediavirus.parvis.gui.MainFrame$26

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$9

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$8

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$7

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$6

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$5

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$4

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$3

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$2

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$9

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$8

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$6

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$5

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$4

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$3

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$25

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$24

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$23

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$22

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$21

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$20

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$2

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$19

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$18

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$17

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$16

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$15

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$14

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$13

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$12

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$11

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$10

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.BrushList$6

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.BrushList$5

actionPerformed(ActionEvent) - Method in class org.mediavirus.parvis.gui.BrushList$3

activeAxis - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

add(Brush) - Method in class org.mediavirus.parvis.model.Brush

Returns a new brush which is the result of a merging of this brush and another brush.

addAxis(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Adds an axis to the end of the display.

addAxis(int, int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Inserts a new axis between the two axes defined by targetRegion.

addAxisMenu - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

addBrushListener(BrushListener) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

addChangeListener(ChangeListener) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Subscribes a ChangeListener with the model.

addChangeListener(ChangeListener) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Subscribes a ChangeListener with the model.

addProgressListener(ProgressListener) - Method in class org.mediavirus.parvis.file.STFFile

Method to add a ProgressListener to get notified of the loading progress.

addProgressListener(ProgressListener) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

addRecord(float[]) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Adds a record.

addRecord(float[], String) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Adds a record.

axes - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

axis -> dimension linking.

axisLabels - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Contains the axis label Strings.

axisScale - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

B

BasicParallelDisplayUI - class org.mediavirus.parvis.gui.BasicParallelDisplayUI.

The UI Delegate, responsible for rendering the ParallelDisplay component.

BasicParallelDisplayUI() - Constructor for class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Default Constructor.

borderH - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

borderV - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

brush - Variable in class org.mediavirus.parvis.gui.RenderThread

brush - Variable in class org.mediavirus.parvis.gui.CorrelationFrame

the current brush

Brush - class org.mediavirus.parvis.model.Brush.

Represents a set of "brushed" records.

BRUSH - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

Brush(float[]) - Constructor for class org.mediavirus.parvis.model.Brush

Creates a new instance of Brush

Brush(int) - Constructor for class org.mediavirus.parvis.model.Brush

Creates a new instance of Brush

Brush(int, Color) - Constructor for class org.mediavirus.parvis.model.Brush

Creates a new instance of Brush

brushChanged - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

brushChanged(Brush) - Method in class org.mediavirus.parvis.gui.MainFrame

brushChanged(Brush) - Method in interface org.mediavirus.parvis.gui.BrushListener

Called when the brush is replaced by a new one.

brushChanged(Brush) - Method in class org.mediavirus.parvis.gui.BrushList

Callback triggered if the current brush of the parent component changed.

brushHoverEnd - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

brushHoverStart - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

brushHoverX - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

brushImg - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

BrushList - class org.mediavirus.parvis.gui.BrushList.

BrushList() - Constructor for class org.mediavirus.parvis.gui.BrushList

Creates new form BrushList

BrushList(ParallelDisplay) - Constructor for class org.mediavirus.parvis.gui.BrushList

Creates a new BrushList for the given parent Component.

BrushList$1 - class org.mediavirus.parvis.gui.BrushList$1.

BrushList$1(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$1

BrushList$2 - class org.mediavirus.parvis.gui.BrushList$2.

BrushList$2(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$2

BrushList$3 - class org.mediavirus.parvis.gui.BrushList$3.

BrushList$3(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$3

BrushList$4 - class org.mediavirus.parvis.gui.BrushList$4.

BrushList$4(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$4

BrushList$5 - class org.mediavirus.parvis.gui.BrushList$5.

BrushList$5(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$5

BrushList$6 - class org.mediavirus.parvis.gui.BrushList$6.

BrushList$6(BrushList) - Constructor for class org.mediavirus.parvis.gui.BrushList$6

BrushListener - interface org.mediavirus.parvis.gui.BrushListener.

brushModified(Brush) - Method in class org.mediavirus.parvis.gui.MainFrame

Callback triggered if the brush has been modified.

brushModified(Brush) - Method in interface org.mediavirus.parvis.gui.BrushListener

Called when the brush is modified.

brushModified(Brush) - Method in class org.mediavirus.parvis.gui.BrushList

Called when the current brush of the parent component is modified, but not replaced by another brush.

brushThread - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

RenderThread instance to render the brushed records.

brushValues - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

brushed values of records

bufferImg - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

C

cFrame - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

clickAxisValue - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

clickModifiers - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

clickValue - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

clone() - Method in class org.mediavirus.parvis.model.Brush

Returns a new Brush identical to this one.

color - Variable in class org.mediavirus.parvis.gui.RenderThread

the color setting for painting records

comp - Variable in class org.mediavirus.parvis.gui.RenderThread

our parent compontent

CorrelationFrame - class org.mediavirus.parvis.gui.CorrelationFrame.

CorrelationFrame(ParallelDisplay) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame

Creates new form CorrelationFrame

CorrelationFrame$1 - class org.mediavirus.parvis.gui.CorrelationFrame$1.

CorrelationFrame$1(CorrelationFrame) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame$1

CorrelationFrame$2 - class org.mediavirus.parvis.gui.CorrelationFrame$2.

CorrelationFrame$2(CorrelationFrame) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame$2

CorrelationFrame$3 - class org.mediavirus.parvis.gui.CorrelationFrame$3.

CorrelationFrame$3(CorrelationFrame) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame$3

CorrelationFrame$4 - class org.mediavirus.parvis.gui.CorrelationFrame$4.

CorrelationFrame$4(CorrelationFrame) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame$4

CorrelationFrame$5 - class org.mediavirus.parvis.gui.CorrelationFrame$5.

CorrelationFrame$5(CorrelationFrame) - Constructor for class org.mediavirus.parvis.gui.CorrelationFrame$5

createUI(JComponent) - Static method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Swing method.

currentBrush - Variable in class org.mediavirus.parvis.gui.BrushList

The current brush, appears in the inputfield.

currentPath - Variable in class org.mediavirus.parvis.gui.MainFrame

D

deepRepaint - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

Whether we have to redraw the whole background.

dimension - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.Axis

doWork - Variable in class org.mediavirus.parvis.gui.RenderThread

the thread is waiting but there is work to do

dragAxis - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

dragBrush - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

dragX - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

drawRecord(Graphics2D, ParallelDisplay, int, int, int) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Draws the given record on the given Graphics object.

E

editMode - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

The mode of interaction we are in.

F

fireBrushChanged(Brush) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

fireBrushModified(Brush) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

fireProgressEvent(ProgressEvent) - Method in class org.mediavirus.parvis.file.STFFile

Dispatches a ProgressEvent to all listeners.

fireProgressEvent(ProgressEvent) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

focusGained(FocusEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$7

G

getAxisLabel(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns a String label for a specific axis.

getAxisLabel(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns a String label for a specific dimension.

getAxisLabel(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns a String label for a specific dimension.

getAxisOffset(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the current offset (translation in axis units) for the axis.

getAxisScale(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the current scale (visible region in axis units) for the axis.

getBoolPreference(String) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getBrushedColor() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Shortcut for preference access.

getBrushedCount() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the number of records that are currently brushed.

getBrushValue(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getBrushValue(int) - Method in class org.mediavirus.parvis.model.Brush

Indexed getter for property brushValue.

getColor() - Method in class org.mediavirus.parvis.model.Brush

Getter for property color.

getColorPreference(String) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getCurrentBrush() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Getter for property currentBrush.

getDescription() - Method in class org.mediavirus.parvis.gui.MainFrame$27

getDescription() - Method in class org.mediavirus.parvis.gui.MainFrame$26

getEditMode() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the currently active interaction mode.

getFloatPreference(String) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getIntPreference(String) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getMaxValue(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns the maximum value for the given dimension.

getMaxValue(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns the maximum value for the given dimension.

getMessage() - Method in class org.mediavirus.parvis.gui.ProgressEvent

getMinValue(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns the minimum value for the given dimension.

getMinValue(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns the minimum value for the given dimension.

getModel() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the model.

getName() - Method in class org.mediavirus.parvis.file.STFFile

Returns the filename (without path).

getName() - Method in class org.mediavirus.parvis.model.Brush

Getter for property name.

getNumAxes() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the number of axes to display.

getNumBrushed() - Method in class org.mediavirus.parvis.model.Brush

Returns the number of brushed records.

getNumBrushedInRange(int, float, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the number of brushed records in the given value range.

getNumDimensions() - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns the number of dimnesions.

getNumDimensions() - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns the number of dimensions (=columns) of the dataset.

getNumRecords() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the number of Records in the model.

getNumRecords() - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns the number of records.

getNumRecords() - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns the number of records in the dataset.

getNumRecordsInRange(int, float, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns the number of records in the given value range.

getNumValues() - Method in class org.mediavirus.parvis.model.Brush

Returns the nuber of records of the dataset.

getPreference(String) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getProgress() - Method in class org.mediavirus.parvis.gui.ProgressEvent

getRecordByCoordinates(int, int, ParallelDisplay) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Returns the record that goes through the screen coordinates x,y.

getRecordColor() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Shortcut for preference access.

getRecordLabel(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getRecordLabel(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns a human-readable label for a specific record.

getRecordLabel(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns a human-readable label for a specific record.

getRecordsByValueRange(int, float, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Returns an array with the ids of the records in the given value range.

getRenderedImage() - Method in class org.mediavirus.parvis.gui.RenderThread

Returns the last rendered image this thread has finished rendering.

getRenderedRegionStart() - Method in class org.mediavirus.parvis.gui.RenderThread

Returns the start axis of the rendered image.

getRenderedRegionStop() - Method in class org.mediavirus.parvis.gui.RenderThread

Returns the stop axis of the rendered image.

getTimestamp() - Method in class org.mediavirus.parvis.gui.ProgressEvent

getType() - Method in class org.mediavirus.parvis.gui.ProgressEvent

getUIClassID() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Swing method.

getValue(int, int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

getValue(int, int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns a specific value of the dataset.

getValue(int, int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns a specific value of the dataset.

getValueLabel(int, float) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns the label for a single value in a specific dimension, if present.

getValueLabel(int, float) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns the label for a single value in a specific dimension, if present.

getValueLabels(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns a Hashtable with labels for specific values.

getValueLabels(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns a Hashtable with labels for specific values.

getValues(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Returns all values of a specific record.

getValues(int) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Returns all values of a specific record.

H

height - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

HISTO_BINREC - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

HISTO_BRUSHREC - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

HISTO_TOTALREC - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

hoverAxis - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

hoverRecord - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

I

inBrush - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

init(ParallelSpaceModel) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Initializes the component with the given model.

initNumDimensions(int) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Sets up all internal variables for the given number of dimensions.

installUI(JComponent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Installs this instance as UI delegate for the given component.

intersect(Brush) - Method in class org.mediavirus.parvis.model.Brush

Returns a new Brush which is the result of an intersection operation of this brush with another brush.

invalidate() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Invalidates the component and causes a complete repaint.

INVERT - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

used to invert axis orientation

isWorking - Variable in class org.mediavirus.parvis.gui.RenderThread

the thread is currently doing some work

isWorking() - Method in class org.mediavirus.parvis.gui.RenderThread

Indicates whether this thread is doing some work right now.

L

label - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.Axis

lastStart - Variable in class org.mediavirus.parvis.gui.RenderThread

the last region that was rendered successfully

lastStop - Variable in class org.mediavirus.parvis.gui.RenderThread

listeners - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

List to store our event subscribers.

M

main(String[]) - Static method in class org.mediavirus.parvis.ParvisMain

Main method which is called by the java interpreter.

main(String[]) - Static method in class org.mediavirus.parvis.file.STFFile

Main method for testing purposes.

main(String[]) - Static method in class org.mediavirus.parvis.gui.MainFrame

main(String[]) - Static method in class org.mediavirus.parvis.gui.BrushList

MainFrame - class org.mediavirus.parvis.gui.MainFrame.

MainFrame() - Constructor for class org.mediavirus.parvis.gui.MainFrame

Creates new form MainFrame

MainFrame$1 - class org.mediavirus.parvis.gui.MainFrame$1.

MainFrame$1(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$1

MainFrame$10 - class org.mediavirus.parvis.gui.MainFrame$10.

MainFrame$10(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$10

MainFrame$11 - class org.mediavirus.parvis.gui.MainFrame$11.

MainFrame$11(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$11

MainFrame$12 - class org.mediavirus.parvis.gui.MainFrame$12.

MainFrame$12(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$12

MainFrame$13 - class org.mediavirus.parvis.gui.MainFrame$13.

MainFrame$13(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$13

MainFrame$14 - class org.mediavirus.parvis.gui.MainFrame$14.

MainFrame$14(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$14

MainFrame$15 - class org.mediavirus.parvis.gui.MainFrame$15.

MainFrame$15(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$15

MainFrame$16 - class org.mediavirus.parvis.gui.MainFrame$16.

MainFrame$16(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$16

MainFrame$17 - class org.mediavirus.parvis.gui.MainFrame$17.

MainFrame$17(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$17

MainFrame$18 - class org.mediavirus.parvis.gui.MainFrame$18.

MainFrame$18(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$18

MainFrame$19 - class org.mediavirus.parvis.gui.MainFrame$19.

MainFrame$19(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$19

MainFrame$2 - class org.mediavirus.parvis.gui.MainFrame$2.

MainFrame$2(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$2

MainFrame$20 - class org.mediavirus.parvis.gui.MainFrame$20.

MainFrame$20(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$20

MainFrame$21 - class org.mediavirus.parvis.gui.MainFrame$21.

MainFrame$21(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$21

MainFrame$22 - class org.mediavirus.parvis.gui.MainFrame$22.

MainFrame$22(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$22

MainFrame$23 - class org.mediavirus.parvis.gui.MainFrame$23.

MainFrame$23(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$23

MainFrame$24 - class org.mediavirus.parvis.gui.MainFrame$24.

MainFrame$24(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$24

MainFrame$25 - class org.mediavirus.parvis.gui.MainFrame$25.

MainFrame$25(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$25

MainFrame$26 - class org.mediavirus.parvis.gui.MainFrame$26.

MainFrame$26(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$26

MainFrame$27 - class org.mediavirus.parvis.gui.MainFrame$27.

MainFrame$27(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$27

MainFrame$3 - class org.mediavirus.parvis.gui.MainFrame$3.

MainFrame$3(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$3

MainFrame$4 - class org.mediavirus.parvis.gui.MainFrame$4.

MainFrame$4(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$4

MainFrame$5 - class org.mediavirus.parvis.gui.MainFrame$5.

MainFrame$5(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$5

MainFrame$6 - class org.mediavirus.parvis.gui.MainFrame$6.

MainFrame$6(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$6

MainFrame$7 - class org.mediavirus.parvis.gui.MainFrame$7.

MainFrame$7(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$7

MainFrame$8 - class org.mediavirus.parvis.gui.MainFrame$8.

MainFrame$8(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$8

MainFrame$9 - class org.mediavirus.parvis.gui.MainFrame$9.

MainFrame$9(MainFrame) - Constructor for class org.mediavirus.parvis.gui.MainFrame$9

metaText - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

metaX - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

metaY - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

minMaxAbsScale() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Configures (scales, translates) all axes to show values between zero (or the nagative minimum of all axes) and the maximum value of all axes on a maximum scale.

minMaxScale() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Configures (scales, translates) all axes to show all values between its minimum and its maximum on a maximum scale.

mouseClicked(MouseEvent) - Method in class org.mediavirus.parvis.gui.BrushList$4

mouseClicked(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when the mouse has been clicked on a component.

mouseDragged(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when a mouse button is pressed on a component and then dragged.

mouseEntered(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when the mouse enters a component.

mouseExited(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when the mouse exits the component.

mouseMoved(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when the mouse button has been moved on a component (with no buttons no down).

mousePressed(MouseEvent) - Method in class org.mediavirus.parvis.gui.CorrelationFrame$5

mousePressed(MouseEvent) - Method in class org.mediavirus.parvis.gui.CorrelationFrame$3

mousePressed(MouseEvent) - Method in class org.mediavirus.parvis.gui.BrushList$2

mousePressed(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when a mouse button has been pressed on a component.

mouseReleased(MouseEvent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Invoked when a mouse button has been released on a component.

N

needsDeepRepaint - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

numDimensions - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

numDimensions - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Number of dimensions of the model.

numRecords - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

O

offset - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.Axis

oldMouseX - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

oldMouseY - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

oldOffset - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

oldScale - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

org.mediavirus.parvis - package org.mediavirus.parvis

org.mediavirus.parvis.file - package org.mediavirus.parvis.file

org.mediavirus.parvis.gui - package org.mediavirus.parvis.gui

org.mediavirus.parvis.model - package org.mediavirus.parvis.model

P

paint(Graphics, JComponent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Renders the component on the screen.

ParallelDisplay - class org.mediavirus.parvis.gui.ParallelDisplay.

The swing GUI Component for displaying a parallel coordinate visualisation.

ParallelDisplay.Axis - class org.mediavirus.parvis.gui.ParallelDisplay.Axis.

Helper class for string the properties of an axis.

ParallelDisplay.Axis(int, float, float, String) - Constructor for class org.mediavirus.parvis.gui.ParallelDisplay.Axis

ParallelDisplay.ParallelPopup - class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup.

Helper class: the popup menu.

ParallelDisplay.ParallelPopup(ParallelDisplay) - Constructor for class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

ParallelDisplay() - Constructor for class org.mediavirus.parvis.gui.ParallelDisplay

Creates a new ParallelDisplay.

ParallelDisplay(ParallelSpaceModel) - Constructor for class org.mediavirus.parvis.gui.ParallelDisplay

Creates a new ParallelDisplay with the given model.

ParallelDisplayUI - class org.mediavirus.parvis.gui.ParallelDisplayUI.

Abstract UI Delegate for the rendering of the ParallelDisplay component.

ParallelDisplayUI() - Constructor for class org.mediavirus.parvis.gui.ParallelDisplayUI

ParallelSpaceModel - interface org.mediavirus.parvis.model.ParallelSpaceModel.

Defines the data model for Parallel Coordinate visualisation.

parent - Variable in class org.mediavirus.parvis.gui.PrefsFrame

parent - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

parent - Variable in class org.mediavirus.parvis.gui.CorrelationFrame

The ParallelDisplay Component we are working for.

parent - Variable in class org.mediavirus.parvis.gui.BrushList

The ParallelDisplay component we are assigned to.

ParvisMain - class org.mediavirus.parvis.ParvisMain.

Launcher Class for unsing Parvis as a standalone application.

ParvisMain() - Constructor for class org.mediavirus.parvis.ParvisMain

popupMenu - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

preferences - Variable in class org.mediavirus.parvis.gui.ParallelDisplay

PrefsFrame - class org.mediavirus.parvis.gui.PrefsFrame.

PrefsFrame(ParallelDisplay) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame

Creates new form PrefsFrame

PrefsFrame$1 - class org.mediavirus.parvis.gui.PrefsFrame$1.

PrefsFrame$1(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$1

PrefsFrame$2 - class org.mediavirus.parvis.gui.PrefsFrame$2.

PrefsFrame$2(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$2

PrefsFrame$3 - class org.mediavirus.parvis.gui.PrefsFrame$3.

PrefsFrame$3(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$3

PrefsFrame$4 - class org.mediavirus.parvis.gui.PrefsFrame$4.

PrefsFrame$4(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$4

PrefsFrame$5 - class org.mediavirus.parvis.gui.PrefsFrame$5.

PrefsFrame$5(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$5

PrefsFrame$6 - class org.mediavirus.parvis.gui.PrefsFrame$6.

PrefsFrame$6(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$6

PrefsFrame$7 - class org.mediavirus.parvis.gui.PrefsFrame$7.

PrefsFrame$7(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$7

PrefsFrame$8 - class org.mediavirus.parvis.gui.PrefsFrame$8.

PrefsFrame$8(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$8

PrefsFrame$9 - class org.mediavirus.parvis.gui.PrefsFrame$9.

PrefsFrame$9(PrefsFrame) - Constructor for class org.mediavirus.parvis.gui.PrefsFrame$9

processProgressEvent(ProgressEvent) - Method in interface org.mediavirus.parvis.gui.ProgressListener

processProgressEvent(ProgressEvent) - Method in class org.mediavirus.parvis.gui.MainFrame

Callback for progress events.

PROGRESS_CANCEL - Static variable in class org.mediavirus.parvis.gui.ProgressEvent

PROGRESS_FINISH - Static variable in class org.mediavirus.parvis.gui.ProgressEvent

PROGRESS_START - Static variable in class org.mediavirus.parvis.gui.ProgressEvent

PROGRESS_UPDATE - Static variable in class org.mediavirus.parvis.gui.ProgressEvent

ProgressEvent - class org.mediavirus.parvis.gui.ProgressEvent.

ProgressEvent(Object, int) - Constructor for class org.mediavirus.parvis.gui.ProgressEvent

Creates new RenderEvent

ProgressEvent(Object, int, float) - Constructor for class org.mediavirus.parvis.gui.ProgressEvent

ProgressEvent(Object, int, float, String) - Constructor for class org.mediavirus.parvis.gui.ProgressEvent

progressive - Variable in class org.mediavirus.parvis.gui.RenderThread

whether we should do progressive rendering

progressiveInterrupted - Variable in class org.mediavirus.parvis.gui.RenderThread

the 2nd pass of progressive rendering has been interrupted

progressiveStartAxis - Variable in class org.mediavirus.parvis.gui.RenderThread

start and stop axis of the quality rendering in progressive mode

progressiveStopAxis - Variable in class org.mediavirus.parvis.gui.RenderThread

start and stop axis of the quality rendering in progressive mode

ProgressListener - interface org.mediavirus.parvis.gui.ProgressListener.

Q

quality - Variable in class org.mediavirus.parvis.gui.RenderThread

whether we are in quality rendering mode

qualitychanged - Variable in class org.mediavirus.parvis.gui.RenderThread

the quality settings of the thread have changed

R

readContents() - Method in class org.mediavirus.parvis.file.STFFile

Reads the contents of the file and exposes them vis the ParallelSpaceModel interface of the class.

readData(Reader) - Method in class org.mediavirus.parvis.file.STFFile

Reads the data lines.

readFirstLine(Reader) - Method in class org.mediavirus.parvis.file.STFFile

Reads the first data line of the file and sets up the number of dimensions.

readHeaderLines(Reader) - Method in class org.mediavirus.parvis.file.STFFile

Reads the header lines and sets up the variable types.

readLine(Reader) - Method in class org.mediavirus.parvis.file.STFFile

Reads on line, skipping comments and empty lines.

recordLabels - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Contains the record label Strings.

removeAxis(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Removes an axis from the display.

removeAxisMenu - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

removeBrushListener(BrushListener) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

removeChangeListener(ChangeListener) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Removes a previously subscribed changeListener.

removeChangeListener(ChangeListener) - Method in interface org.mediavirus.parvis.model.ParallelSpaceModel

Removes a previously subscribed changeListener.

removeProgressListener(ProgressListener) - Method in class org.mediavirus.parvis.file.STFFile

Remove a ProgressListener.

removeProgressListener(ProgressListener) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

render() - Method in class org.mediavirus.parvis.gui.RenderThread

Starts the rendering.

renderAll() - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Helper function to trigger rendering of the whole display.

renderBrush() - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Helper function to trigger rendering of the brush image.

renderedImage - Variable in class org.mediavirus.parvis.gui.RenderThread

the result image

renderQuality - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

renderRegion(int, int) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Helper function to trigger rendering of a given region.

renderThread - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

RenderThread instance to render the dataset.

RenderThread - class org.mediavirus.parvis.gui.RenderThread.

RenderThread(BasicParallelDisplayUI) - Constructor for class org.mediavirus.parvis.gui.RenderThread

Creates a new RenderThread for the given ui delegate.

REORDER - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

reset() - Method in class org.mediavirus.parvis.gui.RenderThread

Throws away the result image and initializes the thread for new rendering.

resetAll() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Resets the display.

resetCursor() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

run() - Method in class org.mediavirus.parvis.gui.RenderThread

The main method of this thread.

S

scale - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.Axis

SCALE - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

secondPass - Variable in class org.mediavirus.parvis.gui.RenderThread

thread is in second pass of progressive rendering

setAvailableAxes(String[]) - Method in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

setAxisLabel(int, String) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Sets the label of a single axis.

setAxisLabels(String[]) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Sets the labels for all axes.

setAxisOffset(int, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Sets the offset (translation in axis units) for the axis.

setAxisScale(int, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Sets the scale (visible region in axis units) for the axis.

setBoolPreference(String, boolean) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setBrush(Brush) - Method in class org.mediavirus.parvis.gui.RenderThread

Toggles brush mode for this thread.

setBrushValue(int, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setBrushValue(int, float) - Method in class org.mediavirus.parvis.model.Brush

Indexed setter for property brushValue.

setBrushValues(float[]) - Method in class org.mediavirus.parvis.model.Brush

Sets the array with brush vallues directly.

setColor(Color) - Method in class org.mediavirus.parvis.model.Brush

Setter for property color.

setCorrelationFrame(CorrelationFrame) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setCurrentBrush(Brush) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Setter for property currentBrush.

setCurrentComponent(ParallelDisplay) - Method in class org.mediavirus.parvis.gui.RenderThread

Helper function to set the component to get the data.

setDefaultPreferences() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Fills the preferences hashtable with initial default values.

setEditMode(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Sets the mode for user interaction with the display.

setFloatPreference(String, float) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setIntPreference(String, int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setModel(ParallelSpaceModel) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Sets the model to display.

setName(String) - Method in class org.mediavirus.parvis.model.Brush

Setter for property name.

setPreference(String, Object) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

setQuality(boolean, boolean) - Method in class org.mediavirus.parvis.gui.RenderThread

Sets the render quality and progressive mode settings of this thread.

setRegion(int, int) - Method in class org.mediavirus.parvis.gui.RenderThread

Sets the region that this thread should render.

setStyle(Stroke, Color) - Method in class org.mediavirus.parvis.gui.RenderThread

Sets the style how records are painted.

setTargetRegion(int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

setUI(ParallelDisplayUI) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Sets the user interface delegate for the component.

setupPopup() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Initializes the popup menu.

setValueLabel(int, float, String) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Sets a single value label for a specific axis.

setValueLabels(int, float[], String[]) - Method in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Sets the value labels for a dimension.

setVisibleAxes(String[]) - Method in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

SimpleParallelSpaceModel - class org.mediavirus.parvis.model.SimpleParallelSpaceModel.

Provides a basic implementation of ParallelSpaceModel.

SimpleParallelSpaceModel() - Constructor for class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Default Constructor.

SimpleParallelSpaceModel(float[][]) - Constructor for class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Initializes the model with a given float[][] array of values.

startAxis - Variable in class org.mediavirus.parvis.gui.RenderThread

start and stop axis of the region to be rendered

stateChanged(ChangeEvent) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Invoked when the model has changed its state.

stateChanged(ChangeEvent) - Method in class org.mediavirus.parvis.gui.CorrelationFrame$4

stateChanged(ChangeEvent) - Method in class org.mediavirus.parvis.gui.CorrelationFrame$2

stepx - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

STFFile - class org.mediavirus.parvis.file.STFFile.

A Simple file parser for reading STF (Simple Table Fomrat) files from URLs.

STFFile(URL) - Constructor for class org.mediavirus.parvis.file.STFFile

Creates a new STFFile with the given url.

stopAxis - Variable in class org.mediavirus.parvis.gui.RenderThread

start and stop axis of the region to be rendered

stroke - Variable in class org.mediavirus.parvis.gui.RenderThread

the stroke setting for painting records

subtract(Brush) - Method in class org.mediavirus.parvis.model.Brush

Returns a new Brush, which is the result of a subtraction of another brush from the values of this brush.

swapAxes(int, int) - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Swaps two axes.

T

targetRegion - Variable in class org.mediavirus.parvis.gui.ParallelDisplay.ParallelPopup

tempBrush - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

tempBrushSwap - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

toString() - Method in class org.mediavirus.parvis.model.Brush

TRANSLATE - Static variable in class org.mediavirus.parvis.gui.ParallelDisplay

U

ui - Variable in class org.mediavirus.parvis.gui.RenderThread

our parents ui delegate

uninstallUI(JComponent) - Method in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

Uninstalls this instance from its component.

updateAxes() - Method in class org.mediavirus.parvis.gui.CorrelationFrame

Initializes the two dropdown lists with the current array of axes.

updateUI() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Swing method.

url - Variable in class org.mediavirus.parvis.file.STFFile

The url of the file.

V

valueChanged(ListSelectionEvent) - Method in class org.mediavirus.parvis.gui.BrushList

Called whenever the value of the selection changes.

valueLabels - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Contains the value label Hashtables.

values - Variable in class org.mediavirus.parvis.model.SimpleParallelSpaceModel

Contains the float[] values.

W

wasInterrupted - Variable in class org.mediavirus.parvis.gui.RenderThread

the last rendering loop has been interrupted

width - Variable in class org.mediavirus.parvis.gui.BasicParallelDisplayUI

windowClosing(WindowEvent) - Method in class org.mediavirus.parvis.gui.PrefsFrame$1

windowClosing(WindowEvent) - Method in class org.mediavirus.parvis.gui.MainFrame$1

windowClosing(WindowEvent) - Method in class org.mediavirus.parvis.gui.CorrelationFrame$1

windowClosing(WindowEvent) - Method in class org.mediavirus.parvis.gui.BrushList$1

writeToFile(File, boolean) - Method in class org.mediavirus.parvis.model.Brush

1.Zeile: "Name des Channels" = String 2.Zeile: "Anzahl der Datenwerte" = integer 3.

Z

zeroMaxScale() - Method in class org.mediavirus.parvis.gui.ParallelDisplay

Configures (scales, translates) all axes to show all values between zero and its maximum on a maximum scale.

A B C D E F G H I L M N O P Q R S T U V W Z